DNA-Seq of Coelomomyces lativittatus CIRM-AVA-1-Amber - SRA

SRX9369087: DNA-Seq of Coelomomyces lativittatus CIRM-AVA-1-Amber
1 ILLUMINA (Illumina HiSeq 2500) run: 11.1M spots, 2.2G bases, 1.3Gb downloads

Design: Infected copepods of the amber mating type were separated from the orange mating type prior to lysis. Liquid was removed and then copepods were washed with sterile water to remove any contaminants. After the gametes were released from the copepods, the copepod carcasses were removed by allowing them to settle in the microfuge tube. Samples were spun for 3 minutes at 6000xg, supernatant removed. DNA was extracted with Qiagen extraction kit and Qiagen genomic tip20 columns and amplified with the Qiagen repli-G Whole Genome Amplification Kit. Illumina Libraries were prepared with the NEB DNA Library Prep Kit

Submitted by: University of California, Riverside

Study: Coelomomyces lativittatus CIRM-AVA-1-Amber Genome sequencing and assembly

PRJNA631428 • SRP288698 • All experiments • All runs

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Coelomomyces lativittatus genome sequencing from Amber spores

Sample: Coelomomyces lativittatus str. CLRM-AVA-1 Amber spore

SAMN14860514 • SRS7590947 • All experiments • All runs

Organism: Coelomomyces lativittatus

Library:

Name: Clat_Amber-CIRM-AVA-1

Instrument: Illumina HiSeq 2500

Strategy: WGA